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BayeScan |
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© Matthieu Foll 2011 | ||||||||
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Detecting natural selection from population-based genetic data |
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BayeScan is a command line
based open source software, published under the GNU General Public License
as published by the Free Software Foundation. BayeScan is coded using
standard C++
and can be easily compiled under any system having a C++
compiler available using the “Makefile”
provided along with the source
code. Since version 2.1, BayeScan now uses OpenMP to implement parallel
calculation on multicore CPUs, and you need to use a compiler
supporting OpenMP.
In Mac OS X 10.7 (Lion), compiling with the gcc version included with
Xcode (gcc-4.2) leads to an error at runtime when using more than one
thread ("Abort trap: 6"). This is apparently a bug in Lion with OpenMP that will certainly be solved in a future update. In the meantime you can compile it using gcc 4.6 available here, as I did myself for the binary version provided.
We provide command line executables ready to be used under Microsoft Windows, Apple Mac OS X (Intel processors), Linux 32bits and 64 bits. We also provide a Graphical User Interface (GUI) version based on the exact same code as the command line version, but only for Microsoft Windows systems. BayeScan is distributed as a single package containing all the necessary files, including manual, source code, executables and R scripts, current version is 2.1: |
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If you have some problems with
version 2.1, you can still download version 2.01, and please report me
what's wrong.
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Last updated by Matthieu Foll 21.01.2012 | visits since January 2011 | |||||||
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