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Arlequin ver 3.5.2.2(released on 02.08.2015) |
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winarl35.zip |
Contains
WinArl35.exe, arlecore64.exe, R graphic
functions, XML stylescheet, and example files. |
arlecore_win.zip |
Contains
32 and 64 bit
versions of
arlecore, as well as a bash
script to automatically analyse all
arlequin project files present in a given directory. Read the arlecore readme
file before using it. |
arlsumstat_win.zip |
Contains 32 and 64 bit versions of arlsumstat.exe to compute summary statistics from arlequin projects, a summary statistics definition file, and a bash script to launch it in a Linux environment (you need to install cygwin under windows) . Read the arlsumstat readme file before using it. |
Example files_win.zip |
Contains examples of arlequin projects. |
test_arlsumstat.zip |
Example of the usage of
arlsumstat to calculate summary statistics from arlequin projects
generated by simcoal3. The bash script test_arlsumstat.sh
will call simcoal3 to simulate a sample drawn from a stationary
population and studied at 10 microsatellite loci. Simulated samples
will be then analyzed with arlsumstat and output written to a new file. |
arlecore_linux.zip |
Contains 64-bit Linux
version of
arlecore, the console version of arlequin, as well as a bash script to
automatically analyse all arlequin project files present in a given
directory, plus example files. Read the arlecore readme
file file before using it. |
arlsumstat_linux.zip | Contains 64-bit Linux version of arlsumstat to compute summary statistics from arlequin projects, a summary statistics definition file, and a bash script to launch it in a Linux environment. Read the arlsumstat readme file before using it. |
Example files_linux.zip | Contains examples of arlequin projects. |
arlecore_macosx.zip |
Contains 64-bit Mac OS X
version of
arlecore, the console version of arlequin, as well as a bash script to
automatically analyse all arlequin project files present in a given
directory. Read the arlecore readme
file file before using it. |
arlsumstat_macosx.zip | Contains 64-bit Mac OS X version of arlsumstat to compute summary statistics from arlequin projects, a summary statistics definition file, and a bash script to launch it in a Linux environment. Read the arlsumstat readme file before using it. |
Example files_linux.zip | Contains
examples of arlequin projects. |
arlequin35.pdf |
Contains the latest Arlequin manual (ver 3.5) describing all new routines and graphical outputs |
arlecore_readme.txt |
Contains
a readme
file describing the use of arlecore, the console version of Arlequin.
This topic is not covered in the Arlequin manual. |
alrsumstat_readme.txt |
Contains a readme file describing the use of arlsumstat, a specific console version of Arlequin producing summary statistics into a single output file. This topic is not covered in the Arlequin manual. |
Rfunctions.zip |
New R functions for R package ver 3.01. The zip file contains a directory called Rfunctions, which needs to replace the Rfunctions directory located in your Arlequin home directory. |
LaunchArlecore.sh |
Bash script to automatically analyse with arlecore all the arlequin projects located in a given directory. Read the arlecore readme file file before using it. Note this script can also be used under windows if you have installed cygwin or msys : Just call it by the command "bash LaunchArlecore.sh" |
LaunchArlsumstat.sh | Bash script to automatically analyse with arlsumstat all the arlequin projects located in a given directory. Read the arlsumstat readme file before using it. Note this script can also be used under windows if you have installed cygwin or msys : Just call it by the command "bash LaunchArlsumstat.sh" |